Sümeyra Demir Kanık
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  • Sümeyra Demir Kanık

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E-Mail
sumeyrakaniksabanciunivedu
Phone
(216) 483 9000 / 2093
Title
Postdoctoral Researcher
Education
Ph.D. Virginia Commonwealth University, 2010

M.S. Fatih University, 2007

B.S. Dokuz Eylul University, 2004
Areas of Interest
Statistical signal and image processing,
Biomedical image/video processing,
Data mining,
Computer aided decision making systems,
Image analysis and pattern recognition,
Brain Computer Interfaces
Publications
  • Article
    Ghani, Muhammad Usman and Mesadi, Fitsum and Demir Kanık, Sümeyra Ümmühan and Argunşah, Ali Özgür and Hobbiss, Anna Felicity and Israely, Inbal and Ünay, Devrim and Taşdizen, Tolga and Çetin, Müjdat (2017) "Dendritic spine classification using shape and appearance features based on two-photon microscopy", Journal of Neuroscience Methods, Vol.279, 13-21 (SCI)
  • Papers in Conference Proceedings
    Ghani, Muhammad Usman and Erdil, Ertunç and Demir Kanık, Sümeyra Ümmühan and Argunşah, Ali Özgür and Hobbiss, Anna Felicity and Israely, Inbal and Ünay, Devrim and Taşdizen, Tolga and Çetin, Müjdat, "Dendritic spine shape analysis: a clustering perspective", Hua, Gang and Jégou, Hervé (eds.), 14th European Conference on Computer Vision (ECCV 2016), Springer International Publishing, September 2016, 256-273
    Ghani, Muhammad Usman and Demir Kanık, Sümeyra Ümmühan and Argunşah, Ali Özgür and Israely, Inbal and Ünay, Devrim and Çetin, Müjdat, "Dendritic spine classification based on two-photon microscopic images using sparse representation (İki foton mikroskobik görüntülerdeki dentritik dikenlerin seyrek temsil kullanarak sınıflandırılması)", 24th Signal Processing and Communication Application Conference (SIU 2016), IEEE (Institute of Electrical and Electronics Engineers), May 2016
    Ghani, Muhammad Usman and Mesadi, Fitsum and Demir Kanık, Sümerya Ümmühan and Argunşah, Ali Özgür and Israely, Inbal and Ünay, Devrim and Taşdizen, Tolga and Çetin, Müjdat, "Dendritic spine shape analysis using disjunctive normal shape models", IEEE International Symposium on Biomedical Imaging, USA: IEEE (Institute of Electrical and Electronics Engineers), April 2016
    Ghani, Muhammad Usman and Demir Kanık, Sümerya Ümmühan and Argunşah, Ali Özgür and Taşdizen, Tolga and Ünay, Devrim and Çetin, Müjdat, "Dendritic spine shape classification from two-photon microscopy images (Dendritik diken şekillerinin iki foton mikroskopi görüntüleri kullanılarak sınıflandırılması)", 23th Signal Processing and Communications Applications Conference (SIU 2015), USA: IEEE (Institute of Electrical and Electronics Engineers), May 2015, 939-942
    Yılmaz, İsmail and Demir Kanık, Sümerya Ümmühan and Taşdizen, Tolga and Çetin, Müjdat, "Semi-supervised adaptation of motor imagery based BCI systems (Hayali motor hareketleri tabanlı BBA sistemlerinde yarı güdümlü uyarlama)", 23th Signal Processing and Communications Applications Conference (SIU 2015), USA: IEEE (Institute of Electrical and Electronics Engineers), May 2015, 1841-1844
  • Before SU Publications

    An automated Method for Analysis of Microcirculation Videos for Accurate Assessment of Tissue Perfusion, S.U. Demir, R. Hamizadeh, R.S. Hobson, K.R. Ward, E.V. Myer and K. Najarian, BMC Medical Imaging, December 2012.

    An Adaptive Entropic Thresholding Technique for Image Processing and Diagnostic Analysis of Microcirculation Videos, Nazanin Mirshahi, Sumeyra U Demir, Kevin Ward, Rosalyn S Hobson, Roya Hakimzadeh, Kayvan Najarian, International Journal On Advances in Life Sciences, February 2011 (invited).

    Vessel Segmentation Based on Multi-Thresholding for Diagnostic Analysis of Microcirculation, Sumeyra U Demir, Nazanin Mirshahi, Kevin Ward, Rosalyn S Hobson, Kayvan Najarian, Circulation, 2009;120:S1491.

    Lung Nodule Detection in X-Ray Images: A New Feature Set, Burçin Buket Oğul, Polat Koşucu, Ahmet Özçam, Sümeyra Demir Kanik, 6th European Conference of the International Federation for Medical and Biological Engineering IFMBE Proceedings Volume 45, 2015, pp 150-155.

    Vessel Extraction of Microcirculatory Video Recordings Using Multi-Thresholding Based Verification Algorithm, S. Demir, N. Mirshahi, K. Ward, R. Hobson, K. Najarian, to appear in: The Second International Conference on Advances in Biotechnologies (BIOTECHNO 2010), Cancun, Mexico, March 7-13, 2010

    Multi-Resolution Entropic-based Image Processing Technique for Diagnostic Analysis of Microcirculation Videos, N. Mirshahi, S. Demir, K. Ward, R. Hobson, K. Najarian, to appear in: The Second International Conference on Advances in Biotechnologies (BIOTECHNO 2010), Cancun, Mexico, March 7-13, 2010 (Best Paper Award)

    Image Processing and Machine Learning for Diagnostic Analysis of Microcirculation, Sumeyra Demir, Nazanin Mirshahi, M. Hakam Tiba, Gerard Draucker, Kevin Ward, Rosalyn Hobson and Kayvan Najarian, IEEE/ICME International Conference on Complex Engineering CME 2009, Phoenix, AZ, USA, April 2009

    Rotation Angle Estimation Algorithms for Textures and Their Real-Time Implementation on the FU-Smart, Cihan Ulas, Sumeyra Demir, Onur Toker, Kemal Fidanboylu, ISPA 2007, Istanbul/Turkey, September 2007

    Usability Evaluation of eLearning Systems by Neural Networks, A. Oztekin, A. Nikov, I. Demirci, S. Demir, I.I. Uzonur, 53th Congress of German Human Factors Association GfA2007, Magdeburg, Germany, March 2007 

    Image Processing and Machine Learning for Diagnostic Analysis of Microcirculation, S. Demir, N. Mirshahi, K. Ward, R. Hobson, and K. Najarian. Filed April 2009.