| Faculty of Engineering and Natural Sciences

Marat Kazanov Faculty of Engineering and Natural Sciences Network Faculty Member maratkazanovsabanciunivedu

Jobs

Network Faculty Member

Areas of Interest

Bioinformatics

Kockler, Zachary W. and Bostan, Hamed and Klimczak, Leszek J. and Hsiao, Yun-Chung and Dennen, Matthew S. and Cook, Molly E. and Mertz, Tony M. and Perelygina, Ludmila and Kazanov, Marat and Li, Jian-Liang and Roberts, Steven A. and Gordenin, Dmitry A. (2026) "APOBEC3A is the predominant global editor of cytosines in human mRNAs and in single-strand RNA viruses", G3 (Genes Genomes Genetics), Vol.16, No.6 (SCI)

Lyskova, Alisa O. and Abasov, Ruslan Kh. and Pavlova, Anna and Matveev, Evgenii V. and Madorskaya, Alexandra V. and Kazanov, Fedor M. and Garshina, Daria V. and Smolnikova, Anna E. and Ponomarev, Gennady V. and Sharova, Elena I. and Ivankov, Dmitry N. and Adebali, Ogün and Gelfand, Mikhail S. and Kazanov, Marat (2026) "MPXV RNA-seq data provide evidence for protection of viral transcripts from APOBEC3 editing", Journal of Virology, Vol.100, No.2 (SCI)

Arzamasov, Aleksandr A. and Rodionov, Dmitry A. and Hibberd, Matthew C. and Guruge, Janaki L. and Kent, James E. and Kazanov, Marat and Leyn, Semen A. and Elane, Marinela L. and Sejane, Kristija and Furst, Annalee and Bode, Lars and Barratt, Michael J. and Gordon, Jeffrey I. and Osterman, Andrei L. (2025) "Integrative genomic reconstruction reveals heterogeneity in carbohydrate utilization across human gut bifidobacteria", Nature Microbiology, Vol.10, No.8, 2031-2047 (SCI)

Kazanov, Fedor M. and Matveev, Evgenii V. and Ponomarev, Gennady V. and Ivankov, Dmitry N. and Kazanov, Marat (2024) "Analysis of the abundance and diversity of RNA secondary structure elements in RNA viruses using the RNAsselem Python package", Scientific Reports, Vol.14, No.1 (SCI)

Matveev, Evgenii V. and Ponomarev, Gennady V. and Kazanov, Marat (2024) "Genome-wide bioinformatics analysis of human protease capacity for proteolytic cleavage of the SARS-CoV-2 spike glycoprotein", Microbiology Spectrum, Vol.12, No.2 (SCI)

Hibberd, Matthew C. and Webber, Daniel M. and Rodionov, Dmitry A. and Henrissat, Suzanne and Chen, Robert Y. and Zhou, Cyrus and Lynn, Hannah M. and Wang, Yi and Chang, Hao Wei and Lee, Evan M. and Lelwala-Guruge, Janaki and Kazanov, Marat and Arzamasov, Aleksandr A. and Leyn, Semen A. and Lombard, Vincent and Terrapon, Nicolas and Henrissat, Bernard and Castillo, Juan J. and Couture, Garret and Bacalzo, Nikita P. and Chen, Ye and Lebrilla, Carlito B. and Mostafa, Ishita and Das, Subhasish and Mahfuz, Mustafa and Barratt, Michael J. and Osterman, Andrei L. and Ahmed, Tahmeed and Gordon, Jeffrey I. (2024) "Bioactive glycans in a microbiome-directed food for children with malnutrition", Nature, Vol.625, No.7993, 157-165 (SCI)

Hudson, Kathleen M. and Klimczak, Leszek J. and Sterling, Joan F. and Burkholder, Adam B. and Kazanov, Marat and Saini, Natalie and Mieczkowski, Piotr A. and Gordenin, Dmitry A. (2023) "Glycidamide-induced hypermutation in yeast single-stranded DNA reveals a ubiquitous clock-like mutational motif in humans", Nucleic Acid Research, Vol.51, No.17, 9075-9100 (SCI)

Matveev, Evgenii V. and Safronov, Vyacheslav V. and Ponomarev, Gennady V. and Kazanov, Marat (2023) "Predicting structural susceptibility of proteins to proteolytic processing", International Journal of Molecular Sciences, Vol.24, No.13 (SCI)

Ponomarev, Gennady V. and Fatykhov, Bulat and Nazarov, Vladimir A. and Abasov, Ruslan and Shvarov, Evgeny and Landik, Nina Vicky and Denisova, Alexandra A. and Chervova, Almira A. and Gelfand, Mikhail S. and Kazanov, Marat (2022) "APOBEC mutagenesis is low in most types of non-B DNA structures", iScience, Vol.25, No.7 (SCI)